I had the same issue of my accurate mag scratching really badly also when I went to the aics mags from ctr mags. It also seemed harder to work the bolt from the mag "biting" the brass.
After comparing the 2 different mags I noticed looking from the nose of the round, the ctr mag lips were longer, allowed less exposed round, and basically held the round below the flat length of the lips.
With the accurate mag lips being shorter, it allowed the round to sit higher, and held it more by the edge of the lips causing the deep scratching.
I took the mag apart and took a file at about the same angle as the round contacted the lip edge and filed that bottom corner edge that runs the length of the lip off on both sides. This gave it a more tapered thickness instead of a sharp squared eged and more surface contact on the under side of the lip for the round to ride instead of sharp edge the round rode on before. I also filed the inside front curve of the mag a little also as the round lifts up coming out of the mag.
Now there is hardly any scratching and the round strips easier and smoother.
I hope this helps and makes sense with out a picture.