here is an experience that may be relevant.
A close buddy of mind got a GAP gun in 300 WM. He took it to another "gunsmith" who installed a YHM brake/adapter for a YHM titanium suppressor with a crush washer. As a side note, the GAP guys are not fans of the YHM suppressors. In any case, we could not get that gun to shoot for shit with any load after that YHM brake was affixed, and we tried a dozen loads/bullets, etc. In the process, over 50-100 rounds of different handloads varying bullets, powders and charges, we did discover that GAP had installed the wrong rings (weaver rings on a Picatinny base), one was loose, (we tightened it, then later swapped out to Badger picatinny rings) and the base also came lose (jeez!) and we tightened that. Even after we fixed the problems, this brand new GAP gun was still like a 1-1.5 MOA gun with handloads, match bullets, multiple experienced shooters.
After sending it back to GAP, and THEN to YHM, eventually it was rectified (now it's a 1/2 MOA gun as guaranteed), but the lesson for this particular gun was clear. The YHM brake screwed the accuracy all to hell.
Your brake could certainly be the problem. We wish we had unscrewed that damned brake much earlier in our troubleshooting. That would have saved us hundreds of dollars in ammo and countless hours in changing scopes and loads (heck, we took a scope off my .25MOA 40-X and put it on this gun during our troubleshooting!), and all the other tribulations we went through to get the gun back to shooting how it should have (and did) when it left GAP.