Now I see what you're saying. Should I contact Savage to have them take a look at the threads?[/QUOTE
The way you worded the OP leads me to believe that YOUR suppressor is still waiting for the ATF to approve and you borrowed the use of someone else's to test on your gun. If this is the case, I'd wait to see what YOUR suppressor does. When you shot with the suppressor, did you install the adapter AT THE SAME TIME or had you already shot the gun with the adapter on it? If threads are the problem, it should show the huge POI shift with or without the suppressor as long as you leave the adapter on.
I had an UN-threaded bbl on a post ban AR15. I sent the bbl to have it threaded. It came back and I installed a YHM adapter on it, which showed the threads to be non-concentric before I ever put the suppressor on. I then sent the bbl to YHM, the maker of my suppressor, and had THEM thread it. I'd seen on their website that they would thread bbls. I figured they couldn't argue about warranty with a baffle strike if THEY threaded the bbl.
If you still have the adapter on your barrel, establish a POI with it in place and then remove it and do the same with a bare muzzle. (no thread protector) Does POI move a huge amount?? I would think it would not move at all or no more than an inch due to harmonics. If it moves a lot, your threads are probably like mine were. Like another poster said, get a gunsmith with a lot of experience threading bbls or maybe the suppressor mfg can fix it for you.
If it's OK with the adapter, but bad with the suppressor, then it would be something with the suppressor or alignment. COULD still be a thread problem causing a slight baffle strike, who knows til you try it?
There are many other threads in here that recommend smiths for bbl threading as well. But DON'T jump to conclusions without SOMEONE doing a little troubleshooting. It will prevent a lot of headache later.
Bear in mind I am NOT the expert a lot of these other guys are-just someone who had a specific problem and corrected it. YMMV